- Predicted Gene MLOC_15459
MLOC_15459 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 128.788 | 101.846 | 92.2388 | 116.575 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 30.1744 | 43.3762 | 63.4869 | 40.7757 |
| INF1 | Young developing inflorescences (5mm) | 66.5937 | 95.9831 | 70.0635 | 76.8013 |
| INF2 | Developing inflorescences (1-1.5 cm) | 28.268 | 27.9309 | 30.4789 | 34.3948 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 242.549 | 247.45 | 384.689 | 339.337 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 79.8391 | 51.444 | 42.4132 | 151.42 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 65.9313 | 67.1836 | 60.4274 | 70.4072 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 211.785 | 216.538 | 174.935 | 544.672 |
CDS Structure of MLOC_15459
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15459.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g47670.2 |
+2 |
5e-53 |
172 |
82/101 (81%) |
13107.m05089 protein hypoxia-responsive family protein, putative, expressed |
| TAIR PP10 |
AT5G27760.1 |
+2 |
1e-34 |
123 |
56/89 (63%) |
Hypoxia-responsive family protein | chr5:9830396-9831559 FORWARD LENGTH=96 |