MLOC_15458 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains33.624431.805832.277337.4571
LEAShoots from the seedlings (10 cm shoot stage)32.908723.631426.710228.1982
INF1Young developing inflorescences (5mm)62.945165.194373.757459.1637
INF2Developing inflorescences (1-1.5 cm)52.529748.756651.471759.1511
ROORoots from the seedlings (10 cm shoot stage)12.956419.441823.427928.8708
NODDeveloping tillers at six leaf stage, 3rd internode19.158324.291528.4072100.861
CAR5Developing grain, bracts removed (5 DPA)30.370635.21138.625436.5295
CAR15Developing grain, bracts removed (15 DPA)13.404213.608310.208730.5138



CDS Structure of MLOC_15458






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15458.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15458.1CUST_2259_PI427708083AvailableAvailablecontig_1570740 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10 AT2G03150.1 +2 5e-27 111 64/170 (38%) | Symbols: emb1579 | ATP/GTP-binding protein family | chr2:952313-959004 FORWARD LENGTH=1340