- Predicted Gene MLOC_15453
MLOC_15453 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.845877 | 3.39239 | 4.32977 | 2.41769 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.85652 | 2.62735 | 2.56025 | 3.30743 |
| INF1 | Young developing inflorescences (5mm) | 12.4126 | 10.77 | 14.1778 | 8.79826 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.2195 | 21.5102 | 26.9118 | 19.7866 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.36114 | 1.87198 | 2.3279 | 1.88282 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.5313 | 4.95616 | 2.66901 | 13.6033 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.89004 | 8.16314 | 8.19156 | 6.89906 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.7702 | 11.6037 | 13.1686 | 23.7045 |
CDS Structure of MLOC_15453
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15453.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g36920.1 |
+1 |
1e-33 |
133 |
68/79 (86%) |
13101.m03743 protein DEAD-box ATP-dependent RNA helicase, putative, expressed |
| TAIR PP10 |
AT5G11170.1 |
+1 |
4e-32 |
127 |
70/98 (71%) |
DEAD/DEAH box RNA helicase family protein | chr5:3553334-3556646 FORWARD LENGTH=427 |