- Predicted Gene MLOC_15448
MLOC_15448 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_15448_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_15448_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 7.54779 | 10.5998 | 8.69873 | 8.88856 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.5893 | 8.21297 | 7.86419 | 7.7411 |
INF1 | Young developing inflorescences (5mm) | 22.8228 | 22.7409 | 22.3042 | 17.6941 |
INF2 | Developing inflorescences (1-1.5 cm) | 23.6879 | 24.5066 | 22.387 | 24.7241 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.69225 | 7.46229 | 6.08698 | 7.68503 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.31177 | 9.51636 | 10.3042 | 31.2246 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.4938 | 12.9683 | 13.695 | 12.1762 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.24856 | 8.63106 | 8.98621 | 18.8966 |
CDS Structure of MLOC_15448
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15448.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g46450.2 |
-1 |
0.0 |
721 |
382/521 (73%) |
13102.m05217 protein helicase conserved C-terminal domain containing protein, expressed |
TAIR PP10 |
AT3G12810.1 |
-1 |
2e-59 |
222 |
151/441 (34%) |
| Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing protein / helicase domain-containing protein | chr3:4065636-4073992 FORWARD LENGTH=2055 |