MLOC_15439 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.893340.7556441.111220.830286
LEAShoots from the seedlings (10 cm shoot stage)02.126560.1413090.835419
INF1Young developing inflorescences (5mm)0.698030.6772010.666910.581004
INF2Developing inflorescences (1-1.5 cm)0.5307120.9088530.7490330.829704
ROORoots from the seedlings (10 cm shoot stage)8.186544.933664.121375.49264
NODDeveloping tillers at six leaf stage, 3rd internode0.2966140.8406331.790342.57634
CAR5Developing grain, bracts removed (5 DPA)4.920626.156434.85395.29311
CAR15Developing grain, bracts removed (15 DPA)3.20663.582382.096857.76282



CDS Structure of MLOC_15439






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15439.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15439.1CUST_2255_PI427708083AvailableAvailablecontig_1570690 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g54240.1 +2 6e-15 70 46/71 (65%) 13104.m05607 protein wound induced protein, putative, expressed
TAIR PP10None-----