MLOC_1543 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9221660.3994470.5545350
LEAShoots from the seedlings (10 cm shoot stage)0.638430.7210750.6935850
INF1Young developing inflorescences (5mm)00.7011951.225110
INF2Developing inflorescences (1-1.5 cm)0.6678281.53792.016070
ROORoots from the seedlings (10 cm shoot stage)00.43273900
NODDeveloping tillers at six leaf stage, 3rd internode0.266290.1363530.6120710
CAR5Developing grain, bracts removed (5 DPA)00.74207500
CAR15Developing grain, bracts removed (15 DPA)0.297233000



CDS Structure of MLOC_1543






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK370416
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370416CUST_21950_PI427708080NoneNoneNone
MLOC_1543.1NoneAvailableNonecontig_1136443 (Not mapped)
MLOC_29490.1NoneAvailableAvailablecontig_201047 (Mapped)
MLOC_48161.1NoneAvailableNonecontig_318675 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----