MLOC_15383 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.80868.22987.853267.85112
LEAShoots from the seedlings (10 cm shoot stage)12.88041.542244.946324.7738
INF1Young developing inflorescences (5mm)34.190835.171733.706828.9166
INF2Developing inflorescences (1-1.5 cm)10.871412.230710.134412.0112
ROORoots from the seedlings (10 cm shoot stage)7.131356.979517.777616.35079
NODDeveloping tillers at six leaf stage, 3rd internode0.02498780.053670.02050650.0949164
CAR5Developing grain, bracts removed (5 DPA)25.543228.130922.044723.3065
CAR15Developing grain, bracts removed (15 DPA)0.06407140.01557310.181380.182815



CDS Structure of MLOC_15383






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15383.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361676NoneNoneNoneNone
MLOC_15383.1CUST_1526_PI427708080AvailableAvailablecontig_157056 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g46480.1 +2 0.0 715 367/419 (88%) 13107.m04905 protein eukaryotic aspartyl protease domain containing protein, expressed
TAIR PP10 AT3G54400.1 +2 9e-164 489 251/403 (62%) Eukaryotic aspartyl protease family protein | chr3:20140291-20142599 REVERSE LENGTH=425