MLOC_1538 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_1538_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_1538_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 25.091 | 21.4009 | 22.9991 | 20.518 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.184 | 15.2016 | 22.3953 | 13.3794 |
INF1 | Young developing inflorescences (5mm) | 13.3884 | 10.605 | 13.8836 | 9.46183 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.8461 | 11.3752 | 11.6138 | 11.0569 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.3202 | 20.0782 | 17.3149 | 19.941 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.41637 | 8.16885 | 8.07504 | 21.3986 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.8553 | 9.35481 | 12.375 | 9.08195 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.47023 | 4.34019 | 5.86361 | 9.70467 |
CDS Structure of MLOC_1538
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1538.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g51700.1 |
-2 |
1e-69 |
219 |
107/110 (97%) |
13101.m05396 protein ras-related protein, putative, expressed |
TAIR PP10 |
AT1G22740.1 |
-2 |
2e-59 |
192 |
92/108 (85%) |
| Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPase homolog G3B | chr1:8049247-8050494 FORWARD LENGTH=203 |