MLOC_15360 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.313217.263215.915414.115
LEAShoots from the seedlings (10 cm shoot stage)7.217811.455811.157482.94933
INF1Young developing inflorescences (5mm)63.659358.001455.987643.5808
INF2Developing inflorescences (1-1.5 cm)52.804963.1550.997955.364
ROORoots from the seedlings (10 cm shoot stage)3.9085511.56597.6128810.7314
NODDeveloping tillers at six leaf stage, 3rd internode0.09991110.318140.5943811.19349
CAR5Developing grain, bracts removed (5 DPA)18.425815.362814.88813.8361
CAR15Developing grain, bracts removed (15 DPA)3.488242.562812.156825.77668



CDS Structure of MLOC_15360






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15360.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15360.1CUST_9313_PI427708080AvailableAvailablecontig_1570506 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g64820.1 +2 0.0 1021 505/568 (89%) 13101.m06994 protein POLA1 - Putative DNA polymerase alpha catalytic subunit, expressed
TAIR PP10 AT5G67100.1 +2 0.0 694 338/568 (60%) | Symbols: ICU2 | DNA-directed DNA polymerases | chr5:26776994-26785104 FORWARD LENGTH=1524