- Predicted Gene MLOC_15329
MLOC_15329 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_15329_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_15329_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.105908 | 0 | 0.101272 | 0.0882253 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0.0334219 | 0 | 0.0418643 | 0.0547556 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0799099 | 0 | 0 | 0.00878913 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0328684 | 0.159949 | 0.0370345 | 0.0591177 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.35087 | 5.8973 | 4.41713 | 9.56583 |
CDS Structure of MLOC_15329
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15329.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g07170.1 |
-3 |
3e-46 |
111 |
73/191 (38%) |
13112.m00748 protein transposon protein, putative, Pong sub-class |
TAIR PP10 |
AT2G13770.1 |
-2 |
1e-11 |
39 |
29/82 (35%) |
CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). | chr2:5736603-5737847 FORWARD LENGTH=343 |