MLOC_15310 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.8953311.91218.578019.58306
LEAShoots from the seedlings (10 cm shoot stage)4.901587.429844.550164.5484
INF1Young developing inflorescences (5mm)21.919219.225821.919816.2258
INF2Developing inflorescences (1-1.5 cm)21.089520.340216.515420.2093
ROORoots from the seedlings (10 cm shoot stage)3.345947.465276.926397.93593
NODDeveloping tillers at six leaf stage, 3rd internode1.505171.633454.424526.75302
CAR5Developing grain, bracts removed (5 DPA)10.230310.57989.871369.32265
CAR15Developing grain, bracts removed (15 DPA)4.622515.011224.026059.42635



CDS Structure of MLOC_15310






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15310.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15310.1CUST_2240_PI427708083AvailableAvailablecontig_1570388 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g12160.1 -2 5e-68 231 137/163 (84%) 13106.m01321 protein AAA-type ATPase family protein, putative, expressed
TAIR PP10 AT3G19740.1 -2 1e-57 201 119/172 (69%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:6855944-6862930 REVERSE LENGTH=993