MLOC_15272 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.08293190.0718820.4205380.220438
LEAShoots from the seedlings (10 cm shoot stage)000.3557050.427419
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.061521700.123211
ROORoots from the seedlings (10 cm shoot stage)1.207870.7436991.141041.25486
NODDeveloping tillers at six leaf stage, 3rd internode0.6999231.139090.04866613.58095
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.064114700.09489610.182332



CDS Structure of MLOC_15272






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15272.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15272.2CUST_9303_PI427708080AvailableAvailablecontig_1570289 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g23350.1 -3 3e-42 151 71/95 (75%) 13105.m02368 protein glycosyl hydrolase family 10 protein, putative, expressed
TAIR PP10 AT4G08160.1 -3 7e-23 97 47/101 (47%) glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr4:5159211-5162694 REVERSE LENGTH=752