- Predicted Gene MLOC_15271
MLOC_15271 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.077757 | 0.267797 | 0.105083 | 0.170623 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.205697 | 0.155396 |
| INF1 | Young developing inflorescences (5mm) | 0.211719 | 0.344287 | 0.0865294 | 0.163353 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.595322 | 0.30286 | 0.375777 | 0.423377 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.125959 | 0.724686 | 0.242318 | 0.601123 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0622526 | 1.06901 | 1.24701 | 3.16822 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.44529 | 0.615772 | 0.773412 | 0.779243 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.38657 | 0.549445 | 0.683334 | 0.911103 |
CDS Structure of MLOC_15271
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15271.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g45080.1 |
+3 |
4e-30 |
124 |
56/107 (52%) |
13108.m04915 protein expressed protein |
| TAIR PP10 |
AT1G15780.1 |
+3 |
9e-15 |
76 |
32/88 (36%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335 |