MLOC_15242 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains36.322332.045131.481738.4963
LEAShoots from the seedlings (10 cm shoot stage)31.104828.039341.340534.2594
INF1Young developing inflorescences (5mm)35.307634.303128.559431.4436
INF2Developing inflorescences (1-1.5 cm)27.335629.540629.31735.8577
ROORoots from the seedlings (10 cm shoot stage)44.531837.806434.454958.2531
NODDeveloping tillers at six leaf stage, 3rd internode1.195011.402962.875667.03921
CAR5Developing grain, bracts removed (5 DPA)42.152438.674135.836643.6451
CAR15Developing grain, bracts removed (15 DPA)7.4437.407015.2846917.7372



CDS Structure of MLOC_15242






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15242.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362396NoneNoneNoneNone
MLOC_15242.1CUST_1514_PI427708080AvailableAvailablecontig_1570211 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g31486.1 +3 0.0 1136 618/686 (90%) 13109.m03151 protein DnaK family protein, putative, expressed
TAIR PP10 AT5G09590.1 +3 0.0 999 514/636 (81%) | Symbols: MTHSC70-2, HSC70-5 | mitochondrial HSO70 2 | chr5:2975721-2978508 FORWARD LENGTH=682