- Predicted Gene MLOC_15227
MLOC_15227 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 13.9669 | 21.379 | 21.372 | 15.6671 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 77.2243 | 91.3314 | 74.0467 | 58.096 |
| INF1 | Young developing inflorescences (5mm) | 22.8131 | 18.9661 | 19.5679 | 14.3352 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.8733 | 19.2187 | 20.9069 | 18.2629 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.96014 | 5.7623 | 7.46268 | 5.13175 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 46.8651 | 23.6146 | 20.8656 | 68.4927 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 24.213 | 21.3958 | 24.4438 | 19.2189 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.9725 | 2.40514 | 2.20129 | 4.03039 |
CDS Structure of MLOC_15227
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15227.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g29370.1 |
+1 |
0.0 |
573 |
283/328 (86%) |
13108.m03033 protein peptidyl-prolyl cis-trans isomerase, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT3G01480.1 |
+1 |
2e-165 |
483 |
239/328 (73%) |
| Symbols: CYP38, ATCYP38 | cyclophilin 38 | chr3:188569-190674 FORWARD LENGTH=437 |