MLOC_15202 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains37.493318.377225.153527.4896
LEAShoots from the seedlings (10 cm shoot stage)16.306616.170831.858619.8571
INF1Young developing inflorescences (5mm)13.750519.209120.163116.7007
INF2Developing inflorescences (1-1.5 cm)16.632815.88116.295319.5494
ROORoots from the seedlings (10 cm shoot stage)61.877721.572925.862235.4803
NODDeveloping tillers at six leaf stage, 3rd internode28.68154.387258.2979182.304
CAR5Developing grain, bracts removed (5 DPA)10.761312.041711.939512.6968
CAR15Developing grain, bracts removed (15 DPA)11.740711.303210.383729.0153



CDS Structure of MLOC_15202






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15202.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15202.1CUST_17566_PI427708080AvailableAvailablecontig_1570128 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g57780.1 +2 0.0 966 533/695 (77%) 13103.m06336 protein protein kinase, putative, expressed
TAIR PP10 AT3G03770.2 +2 0.0 638 363/684 (53%) Leucine-rich repeat protein kinase family protein | chr3:945303-948436 REVERSE LENGTH=802