- Predicted Gene MLOC_15192
MLOC_15192 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.2502 | 9.1369 | 10.5039 | 9.64664 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.237 | 11.4202 | 16.1584 | 10.4594 |
| INF1 | Young developing inflorescences (5mm) | 12.7903 | 12.1057 | 13.9293 | 10.8303 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.5524 | 13.0096 | 15.4669 | 14.5626 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 20.87 | 13.3967 | 15.3511 | 16.6515 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.3099 | 14.6875 | 20.7727 | 45.3616 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.6564 | 15.0723 | 14.0247 | 13.7579 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 19.7811 | 20.3154 | 17.7447 | 44.1688 |
CDS Structure of MLOC_15192
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15192.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g69040.1 |
+2 |
4e-73 |
243 |
139/255 (55%) |
13101.m07534 protein zinc finger, C3HC4 type domain containing protein, expressed |
| TAIR PP10 |
AT5G48655.3 |
+2 |
4e-20 |
92 |
65/233 (28%) |
RING/U-box superfamily protein | chr5:19731575-19732486 REVERSE LENGTH=203 |