- Predicted Gene MLOC_15152
MLOC_15152 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_15152_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_15152_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 7.78906 | 12.3552 | 12.1301 | 10.2559 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.6863 | 8.15363 | 8.42913 | 7.14346 |
INF1 | Young developing inflorescences (5mm) | 22.8295 | 20.1848 | 16.7073 | 15.9985 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.9191 | 16.8534 | 15.9028 | 16.202 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.59224 | 10.7646 | 7.63617 | 10.9242 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.37339 | 6.11846 | 8.1193 | 18.3236 |
CAR5 | Developing grain, bracts removed (5 DPA) | 17.7348 | 17.3985 | 17.0562 | 15.5884 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.83078 | 5.89278 | 6.16054 | 13.5663 |
CDS Structure of MLOC_15152
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15152.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g42180.1 |
+3 |
0.0 |
1387 |
800/981 (82%) |
13107.m04404 protein exportin 1, putative, expressed |
TAIR PP10 |
AT1G72560.3 |
+3 |
0.0 |
897 |
508/1000 (51%) |
| Symbols: PSD | ARM repeat superfamily protein | chr1:27325026-27329467 REVERSE LENGTH=988 |