MLOC_15151 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.94398.653017.713459.19347
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)56.198734.247133.923839.9894
NODDeveloping tillers at six leaf stage, 3rd internode0.03066130.1387260.08623990.332733
CAR5Developing grain, bracts removed (5 DPA)0.2408550.3646990.2249520.310214
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_15151






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15151.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367164NoneNoneNoneNone
MLOC_15151.1CUST_1500_PI427708080AvailableAvailablecontig_1569986 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g42190.1 -1 6e-83 254 151/194 (78%) 13105.m04486 protein NADPH-dependent FMN reductase domain containing protein, expressed
TAIR PP10 AT4G27270.1 -1 3e-77 239 135/193 (70%) Quinone reductase family protein | chr4:13661458-13663243 REVERSE LENGTH=205