MLOC_15149 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.02196470.08435020.03179070.0547665
LEAShoots from the seedlings (10 cm shoot stage)000.03275070.0254284
INF1Young developing inflorescences (5mm)0.08244410.0853840.1030540.0657646
INF2Developing inflorescences (1-1.5 cm)00.032367700.0441313
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.013124100.100203
CAR5Developing grain, bracts removed (5 DPA)0.08419210.07691560.02327130.0567121
CAR15Developing grain, bracts removed (15 DPA)00.022914700.0484012



CDS Structure of MLOC_15149






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15149.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374362NoneNoneNoneNone
MLOC_15149.1CUST_6914_PI427708080AvailableAvailablecontig_1569975 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g32720.1 +2 0.0 1374 678/766 (89%) 13105.m03373 protein early-responsive to dehydration protein-related, putative, expressed
TAIR PP10 AT4G02900.1 +2 0.0 1058 514/756 (68%) ERD (early-responsive to dehydration stress) family protein | chr4:1284066-1287747 FORWARD LENGTH=785