MLOC_15148 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.094212.424212.915914.3307
LEAShoots from the seedlings (10 cm shoot stage)6.472763.51043.077153.95796
INF1Young developing inflorescences (5mm)24.865928.573827.012924.65
INF2Developing inflorescences (1-1.5 cm)18.669619.978920.039723.2299
ROORoots from the seedlings (10 cm shoot stage)8.7374613.324813.869117.4415
NODDeveloping tillers at six leaf stage, 3rd internode1.153150.632561.585192.77571
CAR5Developing grain, bracts removed (5 DPA)13.112414.151813.022314.663
CAR15Developing grain, bracts removed (15 DPA)3.484332.670793.031757.76706



CDS Structure of MLOC_15148






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15148.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376304NoneNoneNoneNone
MLOC_15148.1CUST_1499_PI427708080AvailableAvailablecontig_1569975 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g35690.1 +3 3e-85 266 152/246 (62%) 13110.m03212 protein ribosomal protein S18 containing protein, expressed
TAIR PP10 AT1G07210.1 +3 2e-36 136 77/137 (56%) Ribosomal protein S18 | chr1:2215320-2216668 FORWARD LENGTH=261