- Predicted Gene MLOC_15145
MLOC_15145 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.9104 | 9.38005 | 8.68744 | 9.66078 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.2303 | 3.90948 | 4.22245 | 3.99211 |
| INF1 | Young developing inflorescences (5mm) | 16.423 | 17.0101 | 16.9353 | 14.5438 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.1838 | 16.7322 | 15.6516 | 18.7017 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.90735 | 7.19935 | 10.352 | 9.18926 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.99635 | 3.19646 | 4.3963 | 11.8739 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.17247 | 4.43731 | 5.39884 | 4.61622 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.34004 | 2.69071 | 3.21936 | 7.07646 |
CDS Structure of MLOC_15145
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15145.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g59340.1 |
+3 |
1e-87 |
273 |
136/199 (68%) |
13104.m06253 protein RNA-binding region RNP-1, putative, expressed |
| TAIR PP10 |
AT1G05970.2 |
+3 |
6e-48 |
167 |
80/190 (42%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:1816253-1816991 REVERSE LENGTH=200 |