MLOC_15134 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains310.511192.496224.857246.373
LEAShoots from the seedlings (10 cm shoot stage)22.670450.533357.795238.9082
INF1Young developing inflorescences (5mm)2.636622.837931.861242.38019
INF2Developing inflorescences (1-1.5 cm)4.605351.633812.101633.28708
ROORoots from the seedlings (10 cm shoot stage)552.28345.845382.671455.804
NODDeveloping tillers at six leaf stage, 3rd internode8.7895312.453418.712939.8208
CAR5Developing grain, bracts removed (5 DPA)115.067103.954105.879119.263
CAR15Developing grain, bracts removed (15 DPA)18.716525.863423.679862.457



CDS Structure of MLOC_15134






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15134.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15134.1CUST_2215_PI427708083AvailableAvailablecontig_1569958 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g12290.1 +3 4e-140 407 209/228 (92%) 13103.m01401 protein glutamine synthetase, catalytic domain containing protein, expressed
TAIR PP10 AT1G66200.1 +3 1e-139 405 205/228 (90%) | Symbols: ATGSR2, GSR2, GLN1;2 | glutamine synthase clone F11 | chr1:24655520-24657520 REVERSE LENGTH=356