MLOC_15120 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.0733618.609417.763611.9373
LEAShoots from the seedlings (10 cm shoot stage)28.31622.704921.070818.6458
INF1Young developing inflorescences (5mm)21.463121.83720.457615.2662
INF2Developing inflorescences (1-1.5 cm)27.751427.970724.533725.9638
ROORoots from the seedlings (10 cm shoot stage)5.457314.24179.3073512.6997
NODDeveloping tillers at six leaf stage, 3rd internode11.422513.484310.731739.7133
CAR5Developing grain, bracts removed (5 DPA)25.248521.295426.475820.0232
CAR15Developing grain, bracts removed (15 DPA)13.561112.005213.11724.8011



CDS Structure of MLOC_15120






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15120.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15120.1CUST_9285_PI427708080AvailableAvailablecontig_1569886 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g40990.2 +1 0.0 1326 775/947 (82%) 13101.m04203 protein expressed protein
TAIR PP10 AT2G25730.2 +1 0.0 939 554/930 (60%) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages. | chr2:10956751-10972729 REVERSE LENGTH=2487