MLOC_15081 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.795728.940898.425387.69327
LEAShoots from the seedlings (10 cm shoot stage)5.605954.072282.937253.60729
INF1Young developing inflorescences (5mm)31.85432.412528.49624.7581
INF2Developing inflorescences (1-1.5 cm)35.577936.565732.59236.7472
ROORoots from the seedlings (10 cm shoot stage)5.308759.673259.1361310.6118
NODDeveloping tillers at six leaf stage, 3rd internode0.9523880.6601110.9249642.36267
CAR5Developing grain, bracts removed (5 DPA)16.571815.104314.879514.2478
CAR15Developing grain, bracts removed (15 DPA)2.280762.450432.210624.90837



CDS Structure of MLOC_15081






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15081.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364153NoneNoneNoneNone
MLOC_15081.1CUST_1495_PI427708080AvailableAvailablecontig_1569771 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g56100.1 -2 0.0 1472 737/812 (91%) 13102.m06442 protein ribonucleoside-diphosphate reductase large subunit, putative, expressed
TAIR PP10 AT2G21790.1 -2 0.0 1393 691/817 (85%) | Symbols: R1, RNR1, CLS8, ATRNR1 | ribonucleotide reductase 1 | chr2:9293529-9297580 FORWARD LENGTH=816