MLOC_15068 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.07478870.0506190.0982883
LEAShoots from the seedlings (10 cm shoot stage)0.4189510.279211.016970.508557
INF1Young developing inflorescences (5mm)0.0301771000.0276982
INF2Developing inflorescences (1-1.5 cm)000.03966640.0336386
ROORoots from the seedlings (10 cm shoot stage)3.668772.601820.3133982.90641
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_15068






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15068.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250188.1NoneNoneNoneNone
MLOC_15068.1CUST_122_PI427708083AvailableAvailablecontig_1569744 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g06100.1 +3 3e-146 424 234/344 (68%) 13108.m00605 protein O-methyltransferase, putative, expressed
TAIR PP10 AT5G54160.1 +3 1e-105 320 172/322 (53%) | Symbols: ATOMT1, OMT1 | O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363