MLOC_15020 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.10443600.2459460.156335
LEAShoots from the seedlings (10 cm shoot stage)0.36197800.2434580.281948
INF1Young developing inflorescences (5mm)000.09249650.180302
INF2Developing inflorescences (1-1.5 cm)0.0381069000.0478786
ROORoots from the seedlings (10 cm shoot stage)0.1949120.3597330.1235950.45604
NODDeveloping tillers at six leaf stage, 3rd internode1.992863.42503012.8323
CAR5Developing grain, bracts removed (5 DPA)13.035711.18299.66913.1842
CAR15Developing grain, bracts removed (15 DPA)00.07514500.324438



CDS Structure of MLOC_15020






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15020.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375872NoneNoneNoneNone
MLOC_15020.1CUST_1487_PI427708080AvailableAvailablecontig_1569639 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g50140.1 -2 1e-64 206 103/176 (59%) 13102.m05694 protein caleosin related protein, putative, expressed
TAIR PP10 AT1G70670.1 -2 4e-44 152 85/170 (50%) Caleosin-related family protein | chr1:26644830-26645970 FORWARD LENGTH=195