MLOC_14971 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains318.42238.765229.418265.842
LEAShoots from the seedlings (10 cm shoot stage)138.471114.453153.998114.513
INF1Young developing inflorescences (5mm)482.567539.945563.989460.6
INF2Developing inflorescences (1-1.5 cm)347.18420.045424.645440.993
ROORoots from the seedlings (10 cm shoot stage)239.024281.983382.942344.554
NODDeveloping tillers at six leaf stage, 3rd internode45.50844.072697.7091163.562
CAR5Developing grain, bracts removed (5 DPA)199.695235.158232.103223.628
CAR15Developing grain, bracts removed (15 DPA)61.888465.283447.6746139.081



CDS Structure of MLOC_14971






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14971.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369988NoneNoneNoneNone
MLOC_14971.1CUST_1478_PI427708080AvailableAvailablecontig_1569544 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g41110.2 -3 3e-68 209 99/112 (88%) 13105.m10397 protein ribosomal protein L7Ae, putative, expressed
TAIR PP10 AT1G77940.1 -3 5e-56 177 82/112 (73%) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr1:29304116-29305288 REVERSE LENGTH=112