MLOC_14916 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains62.416954.053954.672860.5536
LEAShoots from the seedlings (10 cm shoot stage)40.934750.344746.49439.5635
INF1Young developing inflorescences (5mm)37.685837.525739.52634.8241
INF2Developing inflorescences (1-1.5 cm)35.650735.255242.189143.207
ROORoots from the seedlings (10 cm shoot stage)71.828775.059777.296792.4492
NODDeveloping tillers at six leaf stage, 3rd internode60.611355.515661.7403171.936
CAR5Developing grain, bracts removed (5 DPA)68.479767.300462.546868.7539
CAR15Developing grain, bracts removed (15 DPA)11.542513.758714.033333.4535



CDS Structure of MLOC_14916






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14916.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251487.1NoneNoneNoneNone
MLOC_14916.1CUST_1469_PI427708080AvailableAvailablecontig_1569402 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g05830.1 -3 6e-177 500 269/291 (92%) 13105.m00619 protein bifunctional protein folD, putative, expressed
TAIR PP10 AT3G12290.1 -3 5e-152 436 230/287 (80%) Amino acid dehydrogenase family protein | chr3:3919591-3921326 FORWARD LENGTH=299