- Predicted Gene MLOC_14915
MLOC_14915 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.6641 | 20.0157 | 18.199 | 20.7421 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.3886 | 10.9671 | 9.85545 | 11.1285 |
| INF1 | Young developing inflorescences (5mm) | 32.562 | 25.5879 | 23.0394 | 25.1854 |
| INF2 | Developing inflorescences (1-1.5 cm) | 24.5888 | 29.2183 | 22.8476 | 32.5371 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.18363 | 15.9152 | 11.0744 | 21.4707 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.21826 | 3.83702 | 5.04324 | 16.8529 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 40.8895 | 36.5548 | 37.925 | 42.6136 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.34944 | 8.88803 | 7.47242 | 22.2769 |
CDS Structure of MLOC_14915
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_14915.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g05840.1 |
+2 |
0.0 |
1216 |
691/868 (80%) |
13105.m00621 protein tRNA synthetase class II core domain containing protein, expressed |
| TAIR PP10 |
AT3G02760.1 |
+2 |
0.0 |
669 |
396/762 (52%) |
Class II aaRS and biotin synthetases superfamily protein | chr3:597588-600650 REVERSE LENGTH=883 |
