MLOC_149 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.13957200.314776
LEAShoots from the seedlings (10 cm shoot stage)0.283940.086741200.157566
INF1Young developing inflorescences (5mm)00.084509300.102834
INF2Developing inflorescences (1-1.5 cm)0.1497830.1457990.2192220.224581
ROORoots from the seedlings (10 cm shoot stage)0.7574150.238830.1205030.313638
NODDeveloping tillers at six leaf stage, 3rd internode0.05940720.05019500.132152
CAR5Developing grain, bracts removed (5 DPA)0.8744412.587923.846632.89012
CAR15Developing grain, bracts removed (15 DPA)0.5830930.6285080.310851.4544



CDS Structure of MLOC_149






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK375303
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375303CUST_22814_PI427708080NoneNoneNone
MLOC_149.1NoneAvailableAvailablecontig_10094 (Mapped)
MLOC_40362.1NoneAvailableNonecontig_2558710 (Mapped)
MLOC_42490.1NoneAvailableNonecontig_26471 (Not mapped)
MLOC_46283.1NoneAvailableNonecontig_288054 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----