MLOC_14887 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.280810.110111.542610.5361
LEAShoots from the seedlings (10 cm shoot stage)2.705092.33826.48152.7575
INF1Young developing inflorescences (5mm)9.6489912.13313.632310.1368
INF2Developing inflorescences (1-1.5 cm)7.523028.575366.317618.47304
ROORoots from the seedlings (10 cm shoot stage)10.12156.877289.597157.89476
NODDeveloping tillers at six leaf stage, 3rd internode1.51182.113253.696385.68689
CAR5Developing grain, bracts removed (5 DPA)6.292027.172337.155276.79085
CAR15Developing grain, bracts removed (15 DPA)2.008031.323972.073674.3072



CDS Structure of MLOC_14887






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14887.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14887.1CUST_17565_PI427708080AvailableAvailablecontig_156934 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g42860.1 -1 2e-35 126 72/140 (51%) 13110.m04049 protein ribosomal protein L35, putative, expressed
TAIR PP10 AT5G45590.1 -1 4e-12 62 29/46 (63%) Ribosomal protein L35 | chr5:18484643-18486227 REVERSE LENGTH=173