MLOC_14818 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3766830.2926440.08391220.247226
LEAShoots from the seedlings (10 cm shoot stage)1.009833.354231.095331.36582
INF1Young developing inflorescences (5mm)0.326481.133080.6029660.537985
INF2Developing inflorescences (1-1.5 cm)0.6686841.156281.246221.00617
ROORoots from the seedlings (10 cm shoot stage)3.761811.604721.873462.15248
NODDeveloping tillers at six leaf stage, 3rd internode12.40416.625719.991950.0584
CAR5Developing grain, bracts removed (5 DPA)38.240241.817743.657136.1863
CAR15Developing grain, bracts removed (15 DPA)2.522342.00391.921184.74786



CDS Structure of MLOC_14818






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14818.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14818.1CUST_2172_PI427708083AvailableAvailablecontig_1569108 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g53850.1 -3 9e-43 154 75/129 (58%) 13104.m05558 protein leucoanthocyanidin reductase, putative, expressed
TAIR PP10 AT1G61720.1 -3 6e-29 115 54/132 (41%) | Symbols: BAN | NAD(P)-binding Rossmann-fold superfamily protein | chr1:22791326-22792757 REVERSE LENGTH=340