MLOC_1481 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.91346.6733710.87020
LEAShoots from the seedlings (10 cm shoot stage)1.666872.090242.452490
INF1Young developing inflorescences (5mm)8.8857810.16878.967710
INF2Developing inflorescences (1-1.5 cm)4.91516.527273.882750
ROORoots from the seedlings (10 cm shoot stage)9.740876.20358.969020
NODDeveloping tillers at six leaf stage, 3rd internode0.3113060.6875080.6939390
CAR5Developing grain, bracts removed (5 DPA)4.507352.558983.358450
CAR15Developing grain, bracts removed (15 DPA)0.1698340.7327121.013390



CDS Structure of MLOC_1481






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362606
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362606CUST_20573_PI427708080NoneNoneNone
MLOC_1481.1NoneAvailableNonecontig_113015 (Mapped)
MLOC_27307.1NoneAvailableNonecontig_182092 (Not mapped)
MLOC_27457.1NoneAvailableNonecontig_1833170 (Not mapped)
MLOC_30793.1NoneAvailableNonecontig_212713 (Not mapped)
MLOC_32458.1NoneAvailableNonecontig_228772 (Not mapped)
MLOC_76754.1NoneAvailableAvailablecontig_72714 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----