- Predicted Gene MLOC_14781
MLOC_14781 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.95081 | 11.8809 | 11.011 | 11.0711 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.5069 | 17.8344 | 16.9702 | 13.8575 |
| INF1 | Young developing inflorescences (5mm) | 17.3303 | 18.5528 | 20.7623 | 15.7217 |
| INF2 | Developing inflorescences (1-1.5 cm) | 26.6512 | 26.0873 | 25.8922 | 28.1683 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.4301 | 16.6269 | 16.4545 | 19.3103 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.6686 | 14.5626 | 14.3387 | 43.8112 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 17.7329 | 19.4725 | 19.3653 | 18.0871 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.5246 | 8.21239 | 7.98322 | 19.8175 |
CDS Structure of MLOC_14781
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_14781.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g32850.1 |
-1 |
3e-155 |
471 |
256/477 (54%) |
13110.m19363 protein hypothetical protein |
| TAIR PP10 |
AT2G20310.1 |
-1 |
4e-30 |
125 |
49/96 (51%) |
| Symbols: RIN13 | RPM1 interacting protein 13 | chr2:8761328-8763083 REVERSE LENGTH=430 |
