MLOC_14780 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.335994.768524.594245.01719
LEAShoots from the seedlings (10 cm shoot stage)3.129182.16262.444712.17437
INF1Young developing inflorescences (5mm)3.363653.501033.468952.72012
INF2Developing inflorescences (1-1.5 cm)3.537313.854774.306433.97158
ROORoots from the seedlings (10 cm shoot stage)5.857774.944223.98785.80938
NODDeveloping tillers at six leaf stage, 3rd internode9.7105515.340716.038748.6481
CAR5Developing grain, bracts removed (5 DPA)3.050174.395834.355913.58633
CAR15Developing grain, bracts removed (15 DPA)1.599051.968771.71033.69755



CDS Structure of MLOC_14780






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14780.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14780.2CUST_9248_PI427708080AvailableAvailablecontig_1569010 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g32830.1 +3 3e-70 234 120/163 (74%) 13110.m02877 protein kinase, pfkB family, putative
TAIR PP10 AT4G28706.4 +3 4e-48 174 89/192 (46%) pfkB-like carbohydrate kinase family protein | chr4:14167805-14172254 FORWARD LENGTH=440