MLOC_14727 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains181.962117.463144.001144.263
LEAShoots from the seedlings (10 cm shoot stage)119.92639.662178.312963.922
INF1Young developing inflorescences (5mm)5.756056.010194.585985.02377
INF2Developing inflorescences (1-1.5 cm)2.354653.494373.05073.60771
ROORoots from the seedlings (10 cm shoot stage)90.223665.500768.350977.2569
NODDeveloping tillers at six leaf stage, 3rd internode1081.641213.68753.2852847.18
CAR5Developing grain, bracts removed (5 DPA)18.080617.549515.827218.2534
CAR15Developing grain, bracts removed (15 DPA)1.211881.787111.564654.12025



CDS Structure of MLOC_14727






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14727.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367117NoneNoneNoneNone
MLOC_14727.1CUST_1444_PI427708080AvailableAvailablecontig_1568778 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g13920.1 -3 1e-155 449 209/265 (79%) 13108.m01491 protein glycosyl hydrolases family 16, putative, expressed
TAIR PP10 AT5G57550.1 -3 9e-92 284 132/257 (51%) | Symbols: XTR3, XTH25 | xyloglucan endotransglucosylase/hydrolase 25 | chr5:23305055-23306384 REVERSE LENGTH=284