MLOC_14712 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains31.493827.693227.530231.3024
LEAShoots from the seedlings (10 cm shoot stage)4.948478.47830.3153793.96533
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.69380210.30920.90970710.8189
NODDeveloping tillers at six leaf stage, 3rd internode0.02933800.01145090.0177928
CAR5Developing grain, bracts removed (5 DPA)00.035241400.0500456
CAR15Developing grain, bracts removed (15 DPA)0.03394830.037266500.119289



CDS Structure of MLOC_14712






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14712.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14712.1CUST_2154_PI427708083AvailableAvailablecontig_1568744 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g42090.2 +3 2e-165 473 235/281 (84%) 13112.m04418 protein methyltransferase domain containing protein, putative, expressed
TAIR PP10 AT3G63410.1 +3 4e-143 414 208/275 (76%) | Symbols: APG1, VTE3, IEP37, E37 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:23415816-23417002 REVERSE LENGTH=338