MLOC_14650 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.6707713.02069.665877.35947
LEAShoots from the seedlings (10 cm shoot stage)15.115912.201111.66329.71816
INF1Young developing inflorescences (5mm)14.676414.273913.17289.57869
INF2Developing inflorescences (1-1.5 cm)17.250516.064915.605515.0465
ROORoots from the seedlings (10 cm shoot stage)4.7434510.83297.683329.26817
NODDeveloping tillers at six leaf stage, 3rd internode7.1557211.21997.5866931.1412
CAR5Developing grain, bracts removed (5 DPA)9.264587.463619.851656.8898
CAR15Developing grain, bracts removed (15 DPA)5.756215.375794.911629.81146



CDS Structure of MLOC_14650






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14650.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14650.1CUST_9237_PI427708080AvailableAvailablecontig_1568600 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10 AT5G23110.1 +3 0.0 4255 2300/4415 (52%) Zinc finger, C3HC4 type (RING finger) family protein | chr5:7758307-7775509 FORWARD LENGTH=4706