MLOC_14629 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.657733.044131.869440.9809
LEAShoots from the seedlings (10 cm shoot stage)14.088912.225813.445512.8802
INF1Young developing inflorescences (5mm)28.460328.886827.855328.5315
INF2Developing inflorescences (1-1.5 cm)20.508721.490619.667426.9089
ROORoots from the seedlings (10 cm shoot stage)19.359727.033228.487840.4116
NODDeveloping tillers at six leaf stage, 3rd internode6.538496.731037.0061824.7719
CAR5Developing grain, bracts removed (5 DPA)27.098630.30927.947434.6236
CAR15Developing grain, bracts removed (15 DPA)3.675014.476574.2769611.5939



CDS Structure of MLOC_14629






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14629.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252448.1NoneNoneNoneNone
MLOC_14629.1CUST_1439_PI427708080AvailableAvailablecontig_1568532 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g04370.1 +1 1e-99 302 148/159 (93%) 13111.m00388 protein ribosomal protein L24, putative, expressed
TAIR PP10 AT5G23535.1 +1 1e-84 263 128/159 (81%) KOW domain-containing protein | chr5:7935871-7937127 FORWARD LENGTH=159