- Predicted Gene MLOC_14629
MLOC_14629 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 35.6577 | 33.0441 | 31.8694 | 40.9809 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 14.0889 | 12.2258 | 13.4455 | 12.8802 |
INF1 | Young developing inflorescences (5mm) | 28.4603 | 28.8868 | 27.8553 | 28.5315 |
INF2 | Developing inflorescences (1-1.5 cm) | 20.5087 | 21.4906 | 19.6674 | 26.9089 |
ROO | Roots from the seedlings (10 cm shoot stage) | 19.3597 | 27.0332 | 28.4878 | 40.4116 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.53849 | 6.73103 | 7.00618 | 24.7719 |
CAR5 | Developing grain, bracts removed (5 DPA) | 27.0986 | 30.309 | 27.9474 | 34.6236 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.67501 | 4.47657 | 4.27696 | 11.5939 |
CDS Structure of MLOC_14629
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_14629.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g04370.1 |
+1 |
1e-99 |
302 |
148/159 (93%) |
13111.m00388 protein ribosomal protein L24, putative, expressed |
TAIR PP10 |
AT5G23535.1 |
+1 |
1e-84 |
263 |
128/159 (81%) |
KOW domain-containing protein | chr5:7935871-7937127 FORWARD LENGTH=159 |