MLOC_14621 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains75.191974.886489.710780.6174
LEAShoots from the seedlings (10 cm shoot stage)67.103576.356994.810269.0615
INF1Young developing inflorescences (5mm)33.445535.3839.052930.3279
INF2Developing inflorescences (1-1.5 cm)36.697630.146936.071337.4597
ROORoots from the seedlings (10 cm shoot stage)154.218148.034162.265186.489
NODDeveloping tillers at six leaf stage, 3rd internode77.85970.511973.0579240.935
CAR5Developing grain, bracts removed (5 DPA)84.982476.410279.221479.9014
CAR15Developing grain, bracts removed (15 DPA)23.790425.329627.913959.2916



CDS Structure of MLOC_14621






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14621.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252720.1NoneNoneNoneNone
MLOC_14621.2CUST_1437_PI427708080AvailableAvailablecontig_1568520 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g07090.1 -1 0.0 788 391/434 (90%) 13105.m00773 protein acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed
TAIR PP10 AT3G51840.1 -1 0.0 686 334/427 (78%) | Symbols: ACX4, ATSCX, ATG6 | acyl-CoA oxidase 4 | chr3:19225653-19229008 REVERSE LENGTH=436