MLOC_14614 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.252952.318963.493433.20818
LEAShoots from the seedlings (10 cm shoot stage)3.874044.103154.366514.41605
INF1Young developing inflorescences (5mm)3.566743.547155.039644.15214
INF2Developing inflorescences (1-1.5 cm)4.964613.855646.170075.93111
ROORoots from the seedlings (10 cm shoot stage)7.117664.794975.50998.20583
NODDeveloping tillers at six leaf stage, 3rd internode3.030751.32684.939658.66515
CAR5Developing grain, bracts removed (5 DPA)3.826324.42744.598064.98232
CAR15Developing grain, bracts removed (15 DPA)2.842482.082242.826166.92146



CDS Structure of MLOC_14614






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14614.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14614.1CUST_11423_PI427708083AvailableAvailablecontig_156850 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g10440.1 -1 5e-57 191 92/100 (92%) 13106.m01132 protein gb protein, putative, expressed
TAIR PP10 AT2G41945.1 -1 8e-39 140 74/117 (63%) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:17511071-17512898 REVERSE LENGTH=158