MLOC_14606 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0279598000.0193744
LEAShoots from the seedlings (10 cm shoot stage)00.04405480.04580730.0863358
INF1Young developing inflorescences (5mm)0.01814100.0230060.0371164
INF2Developing inflorescences (1-1.5 cm)0.03930350.018879700.0429974
ROORoots from the seedlings (10 cm shoot stage)0.109467000.0766952
NODDeveloping tillers at six leaf stage, 3rd internode000.006798520.0184038
CAR5Developing grain, bracts removed (5 DPA)112.58116.146113.586137.54
CAR15Developing grain, bracts removed (15 DPA)26.759218.17621.672461.242



CDS Structure of MLOC_14606






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14606.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14606.2CUST_9233_PI427708080AvailableAvailablecontig_1568487 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g10800.3 +2 3e-179 516 302/392 (77%) 13102.m01207 protein mitochondrial carrier protein, putative, expressed
TAIR PP10 AT4G32400.1 +2 5e-123 370 196/291 (67%) | Symbols: EMB104, SHS1, EMB42, ATBT1 | Mitochondrial substrate carrier family protein | chr4:15638686-15640238 FORWARD LENGTH=392