MLOC_14605 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.9142512.574411.64939.19551
LEAShoots from the seedlings (10 cm shoot stage)14.992410.43688.539069.34501
INF1Young developing inflorescences (5mm)33.08730.112927.298822.5619
INF2Developing inflorescences (1-1.5 cm)28.773132.775628.728830.2349
ROORoots from the seedlings (10 cm shoot stage)4.1905510.13696.420789.76336
NODDeveloping tillers at six leaf stage, 3rd internode6.81687.317276.933623.3095
CAR5Developing grain, bracts removed (5 DPA)18.795917.437219.368415.9862
CAR15Developing grain, bracts removed (15 DPA)9.501137.434757.7220716.7925



CDS Structure of MLOC_14605






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14605.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14605.1CUST_9232_PI427708080AvailableAvailablecontig_1568485 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g47900.1 -1 0.0 650 327/432 (76%) 13102.m05407 protein SET domain protein SDG117, putative, expressed
TAIR PP10 AT2G23740.2 -1 0.0 613 381/1107 (34%) nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding | chr2:10098213-10103229 FORWARD LENGTH=1382