MLOC_14483 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.9301310.65989.8244210.772
LEAShoots from the seedlings (10 cm shoot stage)7.73864.480014.001685.07584
INF1Young developing inflorescences (5mm)11.23929.9431611.04059.56392
INF2Developing inflorescences (1-1.5 cm)8.6046111.296510.508411.6886
ROORoots from the seedlings (10 cm shoot stage)6.031778.72216.1962311.3202
NODDeveloping tillers at six leaf stage, 3rd internode7.361025.697886.2989922.7937
CAR5Developing grain, bracts removed (5 DPA)10.475711.82811.456311.6849
CAR15Developing grain, bracts removed (15 DPA)4.616264.470934.740211.0357



CDS Structure of MLOC_14483






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14483.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14483.2CUST_9222_PI427708080AvailableAvailablecontig_1568180 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g41020.1 -1 0.0 738 369/421 (88%) 13104.m04015 protein kelch repeat protein, putative, expressed
TAIR PP10 AT1G51540.1 -1 0.0 599 281/388 (72%) Galactose oxidase/kelch repeat superfamily protein | chr1:19115702-19117381 FORWARD LENGTH=415