- Predicted Gene MLOC_14483
MLOC_14483 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.93013 | 10.6598 | 9.82442 | 10.772 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.7386 | 4.48001 | 4.00168 | 5.07584 |
INF1 | Young developing inflorescences (5mm) | 11.2392 | 9.94316 | 11.0405 | 9.56392 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.60461 | 11.2965 | 10.5084 | 11.6886 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.03177 | 8.7221 | 6.19623 | 11.3202 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.36102 | 5.69788 | 6.29899 | 22.7937 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.4757 | 11.828 | 11.4563 | 11.6849 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.61626 | 4.47093 | 4.7402 | 11.0357 |
CDS Structure of MLOC_14483
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_14483.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g41020.1 |
-1 |
0.0 |
738 |
369/421 (88%) |
13104.m04015 protein kelch repeat protein, putative, expressed |
TAIR PP10 |
AT1G51540.1 |
-1 |
0.0 |
599 |
281/388 (72%) |
Galactose oxidase/kelch repeat superfamily protein | chr1:19115702-19117381 FORWARD LENGTH=415 |