MLOC_14458 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.0482600.117142
LEAShoots from the seedlings (10 cm shoot stage)0.168040.08884970.07825920.109513
INF1Young developing inflorescences (5mm)0.1342520.1896040.2272840.177282
INF2Developing inflorescences (1-1.5 cm)9.8793713.51749.7758414.4484
ROORoots from the seedlings (10 cm shoot stage)0.09747740.15559600.356862
NODDeveloping tillers at six leaf stage, 3rd internode0.11923600.02928970.0436853
CAR5Developing grain, bracts removed (5 DPA)0.09342620.3446820.09868120.244978
CAR15Developing grain, bracts removed (15 DPA)00.2869040.1311760.674112



CDS Structure of MLOC_14458






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14458.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14458.1NoneAvailableAvailablecontig_1568114 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g43840.2 -2 1e-73 236 110/173 (64%) 13112.m04623 protein ankyrin repeat domain-containing protein, putative, expressed
TAIR PP10 AT3G04710.2 -2 2e-33 128 65/190 (34%) | Symbols: TPR10 | ankyrin repeat family protein | chr3:1278229-1280942 FORWARD LENGTH=455