MLOC_14451 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.953497.538847.90036.60901
LEAShoots from the seedlings (10 cm shoot stage)9.876313.272410.77537.94961
INF1Young developing inflorescences (5mm)15.002618.162623.020712.5003
INF2Developing inflorescences (1-1.5 cm)15.15816.52216.23714.4489
ROORoots from the seedlings (10 cm shoot stage)3.476237.324998.170796.34761
NODDeveloping tillers at six leaf stage, 3rd internode11.96614.850916.475241.6303
CAR5Developing grain, bracts removed (5 DPA)9.509489.743149.731087.54342
CAR15Developing grain, bracts removed (15 DPA)1.652091.374991.007732.75863



CDS Structure of MLOC_14451






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14451.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14451.1CUST_2122_PI427708083AvailableAvailablecontig_1568110 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g57210.1 +3 1e-67 234 122/148 (82%) 13101.m06066 protein katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed
TAIR PP10 AT1G61210.2 +3 3e-35 140 78/144 (54%) Transducin/WD40 repeat-like superfamily protein | chr1:22564785-22571555 FORWARD LENGTH=1179