MLOC_1444 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.13854 | 22.6856 | 19.5026 | 17.312 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 21.0046 | 30.2647 | 18.7491 | 20.3824 |
| INF1 | Young developing inflorescences (5mm) | 34.8504 | 30.561 | 29.364 | 26.2674 |
| INF2 | Developing inflorescences (1-1.5 cm) | 35.983 | 27.5452 | 30.2808 | 33.4992 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.62942 | 10.7005 | 9.49213 | 12.6592 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.29144 | 5.81189 | 6.28324 | 21.4826 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 26.2141 | 22.1764 | 23.1783 | 22.8873 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 28.4398 | 27.6801 | 23.772 | 61.3304 |
CDS Structure of MLOC_1444
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1444.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g37720.1 |
+2 |
0.0 |
896 |
476/550 (87%) |
13112.m03883 protein zinc knuckle family protein, expressed |
| TAIR PP10 |
AT5G49930.1 |
+2 |
0.0 |
660 |
367/550 (67%) |
| Symbols: emb1441 | zinc knuckle (CCHC-type) family protein | chr5:20308260-20312736 REVERSE LENGTH=1080 |