MLOC_1443 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.72208 | 11.8587 | 9.91253 | 8.43556 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.25142 | 3.5352 | 3.35593 | 4.56691 |
| INF1 | Young developing inflorescences (5mm) | 19.3602 | 20.1082 | 24.9096 | 15.6775 |
| INF2 | Developing inflorescences (1-1.5 cm) | 32.2443 | 33.5714 | 31.4589 | 31.9652 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.4073 | 5.10224 | 5.11925 | 4.86217 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.11445 | 7.15734 | 5.03581 | 21.6939 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 24.3265 | 23.5039 | 23.1197 | 20.3663 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.2216 | 8.7824 | 11.4431 | 20.6406 |
CDS Structure of MLOC_1443
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1443.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g37740.1 |
+1 |
0.0 |
1343 |
690/953 (72%) |
13112.m03885 protein resistance protein LR10, putative, expressed |
| TAIR PP10 |
AT3G07040.1 |
+1 |
1e-75 |
273 |
252/934 (27%) |
| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926 |
