MLOC_144 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.973616.654516.810717.9748
LEAShoots from the seedlings (10 cm shoot stage)5.273421.713841.659232.56646
INF1Young developing inflorescences (5mm)19.226221.719817.728316.8465
INF2Developing inflorescences (1-1.5 cm)8.950311.29689.9864311.2559
ROORoots from the seedlings (10 cm shoot stage)11.272913.073813.099215.7855
NODDeveloping tillers at six leaf stage, 3rd internode0.7196920.4241911.161821.82934
CAR5Developing grain, bracts removed (5 DPA)5.434595.845983.677994.99917
CAR15Developing grain, bracts removed (15 DPA)0.7022680.3706971.245631.62327



CDS Structure of MLOC_144






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_144.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_144.1CUST_9208_PI427708080AvailableAvailablecontig_100906 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g51510.3 +3 6e-56 181 87/93 (94%) 13103.m05604 protein ribosomal protein L6, putative, expressed
TAIR PP10 AT2G18400.1 +3 5e-45 152 69/93 (74%) ribosomal protein L6 family protein | chr2:7989665-7989973 REVERSE LENGTH=102